DBCLS SRA
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Interesting & Available SRA Data
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Trends in SRA data
Species
| Homo sapiens | 139943 |
| Mus musculus | 26064 |
| human metagenome | 13682 |
| Saccharomyces cerevisiae | 9612 |
| Streptococcus pneumoniae | 9241 |
| Staphylococcus aureus | 8550 |
| Drosophila melanogaster | 8222 |
| Danio rerio | 7945 |
| human gut metagenome | 7057 |
| Caenorhabditis elegans | 5932 |
| Mycobacterium tuberculosis | 5778 |
| Anopheles gambiae | 4941 |
| Plasmodium falciparum | 4845 |
| rhizosphere metagenome | 4636 |
| unidentified | 3891 |
| Total | 413167 (experiments) |
Study Type
| Whole Genome Sequencing | 16050 |
| Other | 4429 |
| Transcriptome Analysis | 3497 |
| Metagenomics | 2007 |
| Epigenetics | 1165 |
| Population Genomics | 185 |
| RNASeq | 84 |
| Exome Sequencing | 66 |
| Cancer Genomics | 44 |
| Pooled Clone Sequencing | 27 |
| Resequencing | 20 |
| Synthetic Genomics | 8 |
| Gene Regulation Study | 2 |
| Total | 27584 (studies) |
Platform
| Illumina HiSeq 2000 | 230091 |
| Illumina Genome Analyzer II | 53865 |
| 454 GS FLX Titanium | 38509 |
| Illumina Genome Analyzer IIx | 26337 |
| Illumina Genome Analyzer | 13410 |
| 454 GS FLX | 12459 |
| Illumina MiSeq | 10660 |
| unspecified | 7352 |
| 454 GS Junior | 4413 |
| AB SOLiD 4 System | 3921 |
| Complete Genomics | 2574 |
| ... | |
| Total | 413154 (experiments) |
Hot Data
Hot Publications
Transcriptome
Illumina HiSeq 1500
Illumina HiSeq 1500
2014
Nature
Epigenetics
Illumina HiSeq 2000
Illumina HiSeq 2000
2013
Nucleic Acids Res
Other
Illumina Genome Analyzer II
Illumina Genome Analyzer II
2013
BMC Genomics
Whole Genome Seq
Illumina HiSeq 2000
Illumina HiSeq 2000
2013
PLOS One